MetExplore: MetExplore contains a database on metabolomics newtorks, houses the capability to perform metabolic flux analysis, and hosts tools for visualizing metabolic networks.
MetaboAnalyst: MetaboAnalyst is a comprehensive tool for metabolomics analysis. It houses LC/MS data analysis tools as well as tools used for gene-metabolite pathway analysis.
FiD: FiD (Fragment Identificator) is a Windows application to identify product fragments in tandem mass spectrometry.
HORA: HORA is the Human blOood Range vAlidator. It contains standard ranges for metabolites found in human blood and can be used as a reference to compare test samples.
MetaboMiner: Java based application for identifying metabolites in biofluids measured using 2D NMR.